iTunes Library Confusion

Hello I was wondering if anyone could help me with this problem. I have a folder with all of my iTunes music in My Documents/iTunes. But my "iTunes Music Library.xml" and "iTunes Library.itl" are stored in My Documents/My Music/iTunes, which has no music in it. In my iTunes advanced options, I have my iTunes music folder set at My Documents/iTunes, and that is where music goes when I rip it, but for some reason, it keeps storing my library files in the other folder. My question is, how can I keep these files in the My Documents/iTunes folder? I dont want 2 iTunes folders! When I try to move these library files from the My Documents/My Music/iTunes folder to the My Documents/iTunes folder, my Library dissappears in iTunes, like I dont have some setting right, but like I said before I do have it set right! AGh! Can anyone help me???